#! @PERL@ ##--------------------------------------------------------------------## ##--- Cachegrind's annotator. cg_annotate.in ---## ##--------------------------------------------------------------------## # This file is part of Cachegrind, a Valgrind tool for cache # profiling programs. # # Copyright (C) 2002-2015 Nicholas Nethercote # njn@valgrind.org # # This program is free software; you can redistribute it and/or # modify it under the terms of the GNU General Public License as # published by the Free Software Foundation; either version 2 of the # License, or (at your option) any later version. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU # General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA # 02111-1307, USA. # # The GNU General Public License is contained in the file COPYING. #---------------------------------------------------------------------------- # The file format is simple, basically printing the cost centre for every # source line, grouped by files and functions. The details are in # Cachegrind's manual. #---------------------------------------------------------------------------- # Performance improvements record, using cachegrind.out for cacheprof, doing no # source annotation (irrelevant ones removed): # user time # 1. turned off warnings in add_hash_a_to_b() 3.81 --> 3.48s # [now add_array_a_to_b()] # 6. make line_to_CC() return a ref instead of a hash 3.01 --> 2.77s # #10. changed file format to avoid file/fn name repetition 2.40s # (not sure why higher; maybe due to new '.' entries?) #11. changed file format to drop unnecessary end-line "."s 2.36s # (shrunk file by about 37%) #12. switched from hash CCs to array CCs 1.61s #13. only adding b[i] to a[i] if b[i] defined (was doing it if # either a[i] or b[i] was defined, but if b[i] was undefined # it just added 0) 1.48s #14. Stopped converting "." entries to undef and then back 1.16s #15. Using foreach $i (x..y) instead of for ($i = 0...) in # add_array_a_to_b() 1.11s # # Auto-annotating primes: #16. Finding count lengths by int((length-1)/3), not by # commifying (halves the number of commify calls) 1.68s --> 1.47s use warnings; use strict; #---------------------------------------------------------------------------- # Overview: the running example in the comments is for: # - events = A,B,C,D # - --show=C,A,D # - --sort=D,C #---------------------------------------------------------------------------- #---------------------------------------------------------------------------- # Global variables, main data structures #---------------------------------------------------------------------------- # CCs are arrays, the counts corresponding to @events, with 'undef' # representing '.'. This makes things fast (faster than using hashes for CCs) # but we have to use @sort_order and @show_order below to handle the --sort and # --show options, which is a bit tricky. #---------------------------------------------------------------------------- # Total counts for summary (an array reference). my $summary_CC; # Totals for each function, for overall summary. # hash(filename:fn_name => CC array) my %fn_totals; # Individual CCs, organised by filename and line_num for easy annotation. # hash(filename => hash(line_num => CC array)) my %allCCs; # Files chosen for annotation on the command line. # key = basename (trimmed of any directory), value = full filename my %user_ann_files; # Generic description string. my $desc = ""; # Command line of profiled program. my $cmd; # Events in input file, eg. (A,B,C,D) my @events; # Events to show, from command line, eg. (C,A,D) my @show_events; # Map from @show_events indices to @events indices, eg. (2,0,3). Gives the # order in which we must traverse @events in order to show the @show_events, # eg. (@events[$show_order[1]], @events[$show_order[2]]...) = @show_events. # (Might help to think of it like a hash (0 => 2, 1 => 0, 2 => 3).) my @show_order; # Print out the function totals sorted by these events, eg. (D,C). my @sort_events; # Map from @sort_events indices to @events indices, eg. (3,2). Same idea as # for @show_order. my @sort_order; # Thresholds, one for each sort event (or default to 1 if no sort events # specified). We print out functions and do auto-annotations until we've # handled this proportion of all the events thresholded. my @thresholds; my $default_threshold = 0.1; my $single_threshold = $default_threshold; # If on, automatically annotates all files that are involved in getting over # all the threshold counts. my $auto_annotate = 0; # Number of lines to show around each annotated line. my $context = 8; # Directories in which to look for annotation files. my @include_dirs = (""); # Input file name my $input_file = undef; # Version number my $version = "@VERSION@"; # Usage message. my $usage = <<END usage: cg_annotate [options] cachegrind-out-file [source-files...] options for the user, with defaults in [ ], are: -h --help show this message --version show version --show=A,B,C only show figures for events A,B,C [all] --sort=A,B,C sort columns by events A,B,C [event column order] --threshold=<0--20> a function is shown if it accounts for more than x% of the counts of the primary sort event [$default_threshold] --auto=yes|no annotate all source files containing functions that helped reach the event count threshold [no] --context=N print N lines of context before and after annotated lines [8] -I<d> --include=<d> add <d> to list of directories to search for source files cg_annotate is Copyright (C) 2002-2015 Nicholas Nethercote. and licensed under the GNU General Public License, version 2. Bug reports, feedback, admiration, abuse, etc, to: njn\@valgrind.org. END ; # Used in various places of output. my $fancy = '-' x 80 . "\n"; sub safe_div($$) { my ($x, $y) = @_; return ($y == 0 ? 0 : $x / $y); } #----------------------------------------------------------------------------- # Argument and option handling #----------------------------------------------------------------------------- sub process_cmd_line() { for my $arg (@ARGV) { # Option handling if ($arg =~ /^-/) { # --version if ($arg =~ /^--version$/) { die("cg_annotate-$version\n"); # --show=A,B,C } elsif ($arg =~ /^--show=(.*)$/) { @show_events = split(/,/, $1); # --sort=A,B,C # Nb: You can specify thresholds individually, eg. # --sort=A:99,B:95,C:90. These will override any --threshold # argument. } elsif ($arg =~ /^--sort=(.*)$/) { @sort_events = split(/,/, $1); my $th_specified = 0; foreach my $i (0 .. scalar @sort_events - 1) { if ($sort_events[$i] =~ /.*:([\d\.]+)%?$/) { my $th = $1; ($th >= 0 && $th <= 100) or die($usage); $sort_events[$i] =~ s/:.*//; $thresholds[$i] = $th; $th_specified = 1; } else { $thresholds[$i] = 0; } } if (not $th_specified) { @thresholds = (); } # --threshold=X (tolerates a trailing '%') } elsif ($arg =~ /^--threshold=([\d\.]+)%?$/) { $single_threshold = $1; ($1 >= 0 && $1 <= 20) or die($usage); # --auto=yes|no } elsif ($arg =~ /^--auto=yes$/) { $auto_annotate = 1; } elsif ($arg =~ /^--auto=no$/) { $auto_annotate = 0; # --context=N } elsif ($arg =~ /^--context=([\d\.]+)$/) { $context = $1; if ($context < 0) { die($usage); } # We don't handle "-I name" -- there can be no space. } elsif ($arg =~ /^-I$/) { die("Sorry, no space is allowed after a -I flag\n"); # --include=A,B,C. Allow -I=name for backwards compatibility. } elsif ($arg =~ /^(-I=|-I|--include=)(.*)$/) { my $inc = $2; $inc =~ s|/$||; # trim trailing '/' push(@include_dirs, "$inc/"); } else { # -h and --help fall under this case die($usage); } # Argument handling -- annotation file checking and selection. # Stick filenames into a hash for quick 'n easy lookup throughout. } else { if (not defined $input_file) { # First non-option argument is the output file. $input_file = $arg; } else { # Subsequent non-option arguments are source files. my $readable = 0; foreach my $include_dir (@include_dirs) { if (-r $include_dir . $arg) { $readable = 1; } } $readable or die("File $arg not found in any of: @include_dirs\n"); $user_ann_files{$arg} = 1; } } } # Must have chosen an input file if (not defined $input_file) { die($usage); } } #----------------------------------------------------------------------------- # Reading of input file #----------------------------------------------------------------------------- sub max ($$) { my ($x, $y) = @_; return ($x > $y ? $x : $y); } # Add the two arrays; any '.' entries are ignored. Two tricky things: # 1. If $a2->[$i] is undefined, it defaults to 0 which is what we want; we turn # off warnings to allow this. This makes things about 10% faster than # checking for definedness ourselves. # 2. We don't add an undefined count or a ".", even though it's value is 0, # because we don't want to make an $a2->[$i] that is undef become 0 # unnecessarily. sub add_array_a_to_b ($$) { my ($a1, $a2) = @_; my $n = max(scalar @$a1, scalar @$a2); $^W = 0; foreach my $i (0 .. $n-1) { $a2->[$i] += $a1->[$i] if (defined $a1->[$i] && "." ne $a1->[$i]); } $^W = 1; } # Add each event count to the CC array. '.' counts become undef, as do # missing entries (implicitly). sub line_to_CC ($) { my @CC = (split /\s+/, $_[0]); (@CC <= @events) or die("Line $.: too many event counts\n"); return \@CC; } sub read_input_file() { open(INPUTFILE, "< $input_file") || die "Cannot open $input_file for reading\n"; # Read "desc:" lines. my $line; while ($line = <INPUTFILE>) { if ($line =~ s/desc:\s+//) { $desc .= $line; } else { last; } } # Read "cmd:" line (Nb: will already be in $line from "desc:" loop above). ($line =~ s/^cmd:\s+//) or die("Line $.: missing command line\n"); $cmd = $line; chomp($cmd); # Remove newline # Read "events:" line. We make a temporary hash in which the Nth event's # value is N, which is useful for handling --show/--sort options below. $line = <INPUTFILE>; (defined $line && $line =~ s/^events:\s+//) or die("Line $.: missing events line\n"); @events = split(/\s+/, $line); my %events; my $n = 0; foreach my $event (@events) { $events{$event} = $n; $n++ } # If no --show arg give, default to showing all events in the file. # If --show option is used, check all specified events appeared in the # "events:" line. Then initialise @show_order. if (@show_events) { foreach my $show_event (@show_events) { (defined $events{$show_event}) or die("--show event `$show_event' did not appear in input\n"); } } else { @show_events = @events; } foreach my $show_event (@show_events) { push(@show_order, $events{$show_event}); } # Do as for --show, but if no --sort arg given, default to sorting by # column order (ie. first column event is primary sort key, 2nd column is # 2ndary key, etc). if (@sort_events) { foreach my $sort_event (@sort_events) { (defined $events{$sort_event}) or die("--sort event `$sort_event' did not appear in input\n"); } } else { @sort_events = @events; } foreach my $sort_event (@sort_events) { push(@sort_order, $events{$sort_event}); } # If multiple threshold args weren't given via --sort, stick in the single # threshold (either from --threshold if used, or the default otherwise) for # the primary sort event, and 0% for the rest. if (not @thresholds) { foreach my $e (@sort_order) { push(@thresholds, 100); } $thresholds[0] = $single_threshold; } my $currFileName; my $currFileFuncName; my $currFuncCC; my $currFileCCs = {}; # hash(line_num => CC) # Read body of input file. while (<INPUTFILE>) { s/#.*$//; # remove comments if (s/^(-?\d+)\s+//) { my $lineNum = $1; my $CC = line_to_CC($_); defined($currFuncCC) || die; add_array_a_to_b($CC, $currFuncCC); # If currFileName is selected, add CC to currFileName list. We look for # full filename matches; or, if auto-annotating, we have to # remember everything -- we won't know until the end what's needed. defined($currFileCCs) || die; if ($auto_annotate || defined $user_ann_files{$currFileName}) { my $currLineCC = $currFileCCs->{$lineNum}; if (not defined $currLineCC) { $currLineCC = []; $currFileCCs->{$lineNum} = $currLineCC; } add_array_a_to_b($CC, $currLineCC); } } elsif (s/^fn=(.*)$//) { $currFileFuncName = "$currFileName:$1"; $currFuncCC = $fn_totals{$currFileFuncName}; if (not defined $currFuncCC) { $currFuncCC = []; $fn_totals{$currFileFuncName} = $currFuncCC; } } elsif (s/^fl=(.*)$//) { $currFileName = $1; $currFileCCs = $allCCs{$currFileName}; if (not defined $currFileCCs) { $currFileCCs = {}; $allCCs{$currFileName} = $currFileCCs; } # Assume that a "fn=" line is followed by a "fl=" line. $currFileFuncName = undef; } elsif (s/^\s*$//) { # blank, do nothing } elsif (s/^summary:\s+//) { $summary_CC = line_to_CC($_); (scalar(@$summary_CC) == @events) or die("Line $.: summary event and total event mismatch\n"); } else { warn("WARNING: line $. malformed, ignoring\n"); } } # Check if summary line was present if (not defined $summary_CC) { die("missing final summary line, aborting\n"); } close(INPUTFILE); } #----------------------------------------------------------------------------- # Print options used #----------------------------------------------------------------------------- sub print_options () { print($fancy); print($desc); print("Command: $cmd\n"); print("Data file: $input_file\n"); print("Events recorded: @events\n"); print("Events shown: @show_events\n"); print("Event sort order: @sort_events\n"); print("Thresholds: @thresholds\n"); my @include_dirs2 = @include_dirs; # copy @include_dirs shift(@include_dirs2); # remove "" entry, which is always the first unshift(@include_dirs2, "") if (0 == @include_dirs2); my $include_dir = shift(@include_dirs2); print("Include dirs: $include_dir\n"); foreach my $include_dir (@include_dirs2) { print(" $include_dir\n"); } my @user_ann_files = keys %user_ann_files; unshift(@user_ann_files, "") if (0 == @user_ann_files); my $user_ann_file = shift(@user_ann_files); print("User annotated: $user_ann_file\n"); foreach $user_ann_file (@user_ann_files) { print(" $user_ann_file\n"); } my $is_on = ($auto_annotate ? "on" : "off"); print("Auto-annotation: $is_on\n"); print("\n"); } #----------------------------------------------------------------------------- # Print summary and sorted function totals #----------------------------------------------------------------------------- sub mycmp ($$) { my ($c, $d) = @_; # Iterate through sort events (eg. 3,2); return result if two are different foreach my $i (@sort_order) { my ($x, $y); $x = $c->[$i]; $y = $d->[$i]; $x = -1 unless defined $x; $y = -1 unless defined $y; my $cmp = abs($y) <=> abs($x); # reverse sort of absolute size if (0 != $cmp) { return $cmp; } } # Exhausted events, equal return 0; } sub commify ($) { my ($val) = @_; 1 while ($val =~ s/^(-?\d+)(\d{3})/$1,$2/); return $val; } # Because the counts can get very big, and we don't want to waste screen space # and make lines too long, we compute exactly how wide each column needs to be # by finding the widest entry for each one. sub compute_CC_col_widths (@) { my @CCs = @_; my $CC_col_widths = []; # Initialise with minimum widths (from event names) foreach my $event (@events) { push(@$CC_col_widths, length($event)); } # Find maximum width count for each column. @CC_col_width positions # correspond to @CC positions. foreach my $CC (@CCs) { foreach my $i (0 .. scalar(@$CC)-1) { if (defined $CC->[$i]) { # Find length, accounting for commas that will be added my $length = length $CC->[$i]; my $clength = $length + int(($length - 1) / 3); $CC_col_widths->[$i] = max($CC_col_widths->[$i], $clength); } } } return $CC_col_widths; } # Print the CC with each column's size dictated by $CC_col_widths. sub print_CC ($$) { my ($CC, $CC_col_widths) = @_; foreach my $i (@show_order) { my $count = (defined $CC->[$i] ? commify($CC->[$i]) : "."); my $space = ' ' x ($CC_col_widths->[$i] - length($count)); print("$space$count "); } } sub print_events ($) { my ($CC_col_widths) = @_; foreach my $i (@show_order) { my $event = $events[$i]; my $event_width = length($event); my $col_width = $CC_col_widths->[$i]; my $space = ' ' x ($col_width - $event_width); print("$space$event "); } } # Prints summary and function totals (with separate column widths, so that # function names aren't pushed over unnecessarily by huge summary figures). # Also returns a hash containing all the files that are involved in getting the # events count above the thresholds (ie. all the interesting ones). sub print_summary_and_fn_totals () { my @fn_fullnames = keys %fn_totals; # Work out the size of each column for printing (summary and functions # separately). my $summary_CC_col_widths = compute_CC_col_widths($summary_CC); my $fn_CC_col_widths = compute_CC_col_widths(values %fn_totals); # Header and counts for summary print($fancy); print_events($summary_CC_col_widths); print("\n"); print($fancy); print_CC($summary_CC, $summary_CC_col_widths); print(" PROGRAM TOTALS\n"); print("\n"); # Header for functions print($fancy); print_events($fn_CC_col_widths); print(" file:function\n"); print($fancy); # Sort function names into order dictated by --sort option. @fn_fullnames = sort { mycmp($fn_totals{$a}, $fn_totals{$b}) } @fn_fullnames; # Assertion (scalar @sort_order == scalar @thresholds) or die("sort_order length != thresholds length:\n", " @sort_order\n @thresholds\n"); my $threshold_files = {}; # @curr_totals has the same shape as @sort_order and @thresholds my @curr_totals = (); foreach my $e (@thresholds) { push(@curr_totals, 0); } # Print functions, stopping when the threshold has been reached. foreach my $fn_name (@fn_fullnames) { my $fn_CC = $fn_totals{$fn_name}; # Stop when we've reached all the thresholds my $any_thresholds_exceeded = 0; foreach my $i (0 .. scalar @thresholds - 1) { my $prop = safe_div(abs($fn_CC->[$sort_order[$i]] * 100), abs($summary_CC->[$sort_order[$i]])); $any_thresholds_exceeded ||= ($prop >= $thresholds[$i]); } last if not $any_thresholds_exceeded; # Print function results print_CC($fn_CC, $fn_CC_col_widths); print(" $fn_name\n"); # Update the threshold counts my $filename = $fn_name; $filename =~ s/:.+$//; # remove function name $threshold_files->{$filename} = 1; foreach my $i (0 .. scalar @sort_order - 1) { $curr_totals[$i] += $fn_CC->[$sort_order[$i]] if (defined $fn_CC->[$sort_order[$i]]); } } print("\n"); return $threshold_files; } #----------------------------------------------------------------------------- # Annotate selected files #----------------------------------------------------------------------------- # Issue a warning that the source file is more recent than the input file. sub warning_on_src_more_recent_than_inputfile ($) { my $src_file = $_[0]; my $warning = <<END @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @ Source file '$src_file' is more recent than input file '$input_file'. @ Annotations may not be correct. @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ END ; print($warning); } # If there is information about lines not in the file, issue a warning # explaining possible causes. sub warning_on_nonexistent_lines ($$$) { my ($src_more_recent_than_inputfile, $src_file, $excess_line_nums) = @_; my $cause_and_solution; if ($src_more_recent_than_inputfile) { $cause_and_solution = <<END @@ cause: '$src_file' has changed since information was gathered. @@ If so, a warning will have already been issued about this. @@ solution: Recompile program and rerun under "valgrind --cachesim=yes" to @@ gather new information. END # We suppress warnings about .h files } elsif ($src_file =~ /\.h$/) { $cause_and_solution = <<END @@ cause: bug in the Valgrind's debug info reader that screws up with .h @@ files sometimes @@ solution: none, sorry END } else { $cause_and_solution = <<END @@ cause: not sure, sorry END } my $warning = <<END @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ WARNING @@ @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@ @@ Information recorded about lines past the end of '$src_file'. @@ @@ Probable cause and solution: $cause_and_solution@@ @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ END ; print($warning); } sub annotate_ann_files($) { my ($threshold_files) = @_; my %all_ann_files; my @unfound_auto_annotate_files; my $printed_totals_CC = []; # If auto-annotating, add interesting files (but not "???") if ($auto_annotate) { delete $threshold_files->{"???"}; %all_ann_files = (%user_ann_files, %$threshold_files) } else { %all_ann_files = %user_ann_files; } # Track if we did any annotations. my $did_annotations = 0; LOOP: foreach my $src_file (keys %all_ann_files) { my $opened_file = ""; my $full_file_name = ""; # Nb: include_dirs already includes "", so it works in the case # where the filename has the full path. foreach my $include_dir (@include_dirs) { my $try_name = $include_dir . $src_file; if (open(INPUTFILE, "< $try_name")) { $opened_file = $try_name; $full_file_name = ($include_dir eq "" ? $src_file : "$include_dir + $src_file"); last; } } if (not $opened_file) { # Failed to open the file. If chosen on the command line, die. # If arose from auto-annotation, print a little message. if (defined $user_ann_files{$src_file}) { die("File $src_file not opened in any of: @include_dirs\n"); } else { push(@unfound_auto_annotate_files, $src_file); } } else { # File header (distinguish between user- and auto-selected files). print("$fancy"); my $ann_type = (defined $user_ann_files{$src_file} ? "User" : "Auto"); print("-- $ann_type-annotated source: $full_file_name\n"); print("$fancy"); # Get file's CCs my $src_file_CCs = $allCCs{$src_file}; if (!defined $src_file_CCs) { print(" No information has been collected for $src_file\n\n"); next LOOP; } $did_annotations = 1; # Numeric, not lexicographic sort! my @line_nums = sort {$a <=> $b} keys %$src_file_CCs; # If $src_file more recent than cachegrind.out, issue warning my $src_more_recent_than_inputfile = 0; if ((stat $opened_file)[9] > (stat $input_file)[9]) { $src_more_recent_than_inputfile = 1; warning_on_src_more_recent_than_inputfile($src_file); } # Work out the size of each column for printing my $CC_col_widths = compute_CC_col_widths(values %$src_file_CCs); # Events header print_events($CC_col_widths); print("\n\n"); # Shift out 0 if it's in the line numbers (from unknown entries, # likely due to bugs in Valgrind's stabs debug info reader) shift(@line_nums) if (0 == $line_nums[0]); # Finds interesting line ranges -- all lines with a CC, and all # lines within $context lines of a line with a CC. my $n = @line_nums; my @pairs; for (my $i = 0; $i < $n; $i++) { push(@pairs, $line_nums[$i] - $context); # lower marker while ($i < $n-1 && $line_nums[$i] + 2*$context >= $line_nums[$i+1]) { $i++; } push(@pairs, $line_nums[$i] + $context); # upper marker } # Annotate chosen lines, tracking total counts of lines printed $pairs[0] = 1 if ($pairs[0] < 1); while (@pairs) { my $low = shift @pairs; my $high = shift @pairs; while ($. < $low-1) { my $tmp = <INPUTFILE>; last unless (defined $tmp); # hack to detect EOF } my $src_line; # Print line number, unless start of file print("-- line $low " . '-' x 40 . "\n") if ($low != 1); while (($. < $high) && ($src_line = <INPUTFILE>)) { if (defined $line_nums[0] && $. == $line_nums[0]) { print_CC($src_file_CCs->{$.}, $CC_col_widths); add_array_a_to_b($src_file_CCs->{$.}, $printed_totals_CC); shift(@line_nums); } else { print_CC( [], $CC_col_widths); } print(" $src_line"); } # Print line number, unless EOF if ($src_line) { print("-- line $high " . '-' x 40 . "\n"); } else { last; } } # If there was info on lines past the end of the file... if (@line_nums) { foreach my $line_num (@line_nums) { print_CC($src_file_CCs->{$line_num}, $CC_col_widths); print(" <bogus line $line_num>\n"); } print("\n"); warning_on_nonexistent_lines($src_more_recent_than_inputfile, $src_file, \@line_nums); } print("\n"); # Print summary of counts attributed to file but not to any # particular line (due to incomplete debug info). if ($src_file_CCs->{0}) { print_CC($src_file_CCs->{0}, $CC_col_widths); print(" <counts for unidentified lines in $src_file>\n\n"); } close(INPUTFILE); } } # Print list of unfound auto-annotate selected files. if (@unfound_auto_annotate_files) { print("$fancy"); print("The following files chosen for auto-annotation could not be found:\n"); print($fancy); foreach my $f (@unfound_auto_annotate_files) { print(" $f\n"); } print("\n"); } # If we did any annotating, print what proportion of events were covered by # annotated lines above. if ($did_annotations) { my $percent_printed_CC; foreach (my $i = 0; $i < @$summary_CC; $i++) { $percent_printed_CC->[$i] = sprintf("%.0f", 100 * safe_div(abs($printed_totals_CC->[$i]), abs($summary_CC->[$i]))); } my $pp_CC_col_widths = compute_CC_col_widths($percent_printed_CC); print($fancy); print_events($pp_CC_col_widths); print("\n"); print($fancy); print_CC($percent_printed_CC, $pp_CC_col_widths); print(" percentage of events annotated\n\n"); } } #---------------------------------------------------------------------------- # "main()" #---------------------------------------------------------------------------- process_cmd_line(); read_input_file(); print_options(); my $threshold_files = print_summary_and_fn_totals(); annotate_ann_files($threshold_files); ##--------------------------------------------------------------------## ##--- end cg_annotate.in ---## ##--------------------------------------------------------------------##