/* * mksary.c for libdivsufsort * Copyright (c) 2003-2008 Yuta Mori All Rights Reserved. * * Permission is hereby granted, free of charge, to any person * obtaining a copy of this software and associated documentation * files (the "Software"), to deal in the Software without * restriction, including without limitation the rights to use, * copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the * Software is furnished to do so, subject to the following * conditions: * * The above copyright notice and this permission notice shall be * included in all copies or substantial portions of the Software. * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, * EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES * OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND * NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT * HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, * WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR * OTHER DEALINGS IN THE SOFTWARE. */ #if HAVE_CONFIG_H # include "config.h" #endif #include <stdio.h> #if HAVE_STRING_H # include <string.h> #endif #if HAVE_STDLIB_H # include <stdlib.h> #endif #if HAVE_MEMORY_H # include <memory.h> #endif #if HAVE_STDDEF_H # include <stddef.h> #endif #if HAVE_STRINGS_H # include <strings.h> #endif #if HAVE_SYS_TYPES_H # include <sys/types.h> #endif #if HAVE_IO_H && HAVE_FCNTL_H # include <io.h> # include <fcntl.h> #endif #include <time.h> #include <divsufsort.h> #include "lfs.h" static void print_help(const char *progname, int status) { fprintf(stderr, "mksary, a simple suffix array builder, version %s.\n", divsufsort_version()); fprintf(stderr, "usage: %s INFILE OUTFILE\n\n", progname); exit(status); } int main(int argc, const char *argv[]) { FILE *fp, *ofp; const char *fname, *ofname; sauchar_t *T; saidx_t *SA; LFS_OFF_T n; clock_t start, finish; saint_t needclose = 3; /* Check arguments. */ if((argc == 1) || (strcmp(argv[1], "-h") == 0) || (strcmp(argv[1], "--help") == 0)) { print_help(argv[0], EXIT_SUCCESS); } if(argc != 3) { print_help(argv[0], EXIT_FAILURE); } /* Open a file for reading. */ if(strcmp(argv[1], "-") != 0) { #if HAVE_FOPEN_S if(fopen_s(&fp, fname = argv[1], "rb") != 0) { #else if((fp = LFS_FOPEN(fname = argv[1], "rb")) == NULL) { #endif fprintf(stderr, "%s: Cannot open file `%s': ", argv[0], fname); perror(NULL); exit(EXIT_FAILURE); } } else { #if HAVE__SETMODE && HAVE__FILENO if(_setmode(_fileno(stdin), _O_BINARY) == -1) { fprintf(stderr, "%s: Cannot set mode: ", argv[0]); perror(NULL); exit(EXIT_FAILURE); } #endif fp = stdin; fname = "stdin"; needclose ^= 1; } /* Open a file for writing. */ if(strcmp(argv[2], "-") != 0) { #if HAVE_FOPEN_S if(fopen_s(&ofp, ofname = argv[2], "wb") != 0) { #else if((ofp = LFS_FOPEN(ofname = argv[2], "wb")) == NULL) { #endif fprintf(stderr, "%s: Cannot open file `%s': ", argv[0], ofname); perror(NULL); exit(EXIT_FAILURE); } } else { #if HAVE__SETMODE && HAVE__FILENO if(_setmode(_fileno(stdout), _O_BINARY) == -1) { fprintf(stderr, "%s: Cannot set mode: ", argv[0]); perror(NULL); exit(EXIT_FAILURE); } #endif ofp = stdout; ofname = "stdout"; needclose ^= 2; } /* Get the file size. */ if(LFS_FSEEK(fp, 0, SEEK_END) == 0) { n = LFS_FTELL(fp); rewind(fp); if(n < 0) { fprintf(stderr, "%s: Cannot ftell `%s': ", argv[0], fname); perror(NULL); exit(EXIT_FAILURE); } if(0x7fffffff <= n) { fprintf(stderr, "%s: Input file `%s' is too big.\n", argv[0], fname); exit(EXIT_FAILURE); } } else { fprintf(stderr, "%s: Cannot fseek `%s': ", argv[0], fname); perror(NULL); exit(EXIT_FAILURE); } /* Allocate 5blocksize bytes of memory. */ T = (sauchar_t *)malloc((size_t)n * sizeof(sauchar_t)); SA = (saidx_t *)malloc((size_t)n * sizeof(saidx_t)); if((T == NULL) || (SA == NULL)) { fprintf(stderr, "%s: Cannot allocate memory.\n", argv[0]); exit(EXIT_FAILURE); } /* Read n bytes of data. */ if(fread(T, sizeof(sauchar_t), (size_t)n, fp) != (size_t)n) { fprintf(stderr, "%s: %s `%s': ", argv[0], (ferror(fp) || !feof(fp)) ? "Cannot read from" : "Unexpected EOF in", fname); perror(NULL); exit(EXIT_FAILURE); } if(needclose & 1) { fclose(fp); } /* Construct the suffix array. */ fprintf(stderr, "%s: %" PRIdOFF_T " bytes ... ", fname, n); start = clock(); if(divsufsort(T, SA, (saidx_t)n) != 0) { fprintf(stderr, "%s: Cannot allocate memory.\n", argv[0]); exit(EXIT_FAILURE); } finish = clock(); fprintf(stderr, "%.4f sec\n", (double)(finish - start) / (double)CLOCKS_PER_SEC); /* Write the suffix array. */ if(fwrite(SA, sizeof(saidx_t), (size_t)n, ofp) != (size_t)n) { fprintf(stderr, "%s: Cannot write to `%s': ", argv[0], ofname); perror(NULL); exit(EXIT_FAILURE); } if(needclose & 2) { fclose(ofp); } /* Deallocate memory. */ free(SA); free(T); return 0; }